Table 2 Top 10 up-regulated and 10 down-regulated lncRNAs between HCM patients and controls
From: Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy
lncRNA ID | FC (abs) | Regulation | FDR | Chrosome | Strand | Start1 | End1 | Class | Database |
|---|---|---|---|---|---|---|---|---|---|
ENST00000472913.1 | 8.29 | up | 5.11E–19 | 3 | + | 155203591 | 155204910 | Intronic | ENSEMBL |
ENST00000588634.1 | 10.05 | up | 1.01E–15 | 19 | + | 11314303 | 11326844 | Antisense | ENSEMBL |
TCONS_00006679 | 12.76 | up | 1.99E–10 | 3 | - | 148164072 | 148173245 | Intergenic | Human LincRNA Catalog |
ENST00000440196.2 | 12.93 | up | 3.48E–21 | 1 | - | 529832 | 530597 | Intergenic | ENSEMBL |
TCONS_00024565 | 14.61 | up | 1.60E–18 | 16 | - | 3995946 | 4002465 | Intergenic | Human LincRNA Catalog |
ENST00000445814.1 | 14.90 | up | 1.28E–01 | X | - | 73047635 | 73051045 | Intergenic | ENSEMBL |
TCONS_00017343 | 15.20 | up | 8.42E–02 | X | - | 73040858 | 73061243 | Intergenic | Human LincRNA Catalog |
TCONS_00017432 | 27.97 | up | 6.45E–02 | X | + | 73045949 | 73047819 | Intergenic | Human LincRNA Catalog |
XR_110349.1 | 0.13 | down | 9.57E–15 | 12 | - | 49626572 | 49658539 | Divergent | RefSeq |
ENST00000450016.1 | 0.14 | down | 1.92E–07 | 7 | + | 44888657 | 44889164 | Divergent | ENSEMBL |
ENST00000443565.1 | 0.15 | down | 2.14E–04 | 1 | + | 81106968 | 81112473 | Intergenic | ENSEMBL |
HIT000075931 | 0.15 | down | 6.17E–22 | 5 | - | 172083325 | 172083570 | Intronic | H-InvDB |
TCONS_00022136 | 0.16 | down | 8.21E–09 | 13 | + | 20530916 | 20532202 | Divergent | Human LincRNA Catalog |
ENST00000376482.3 | 0.17 | down | 4.56E–16 | 7 | + | 99728586 | 99738062 | Intergenic | ENSEMBL |
uc.324- | 0.19 | down | 5.29E–01 | 11 | - | 30557520 | 30557745 | Antisense | UCR |
TCONS_00014990 | 0.19 | down | 2.04E–16 | 8 | - | 41998257 | 41998755 | Intergenic | Human LincRNA Catalog |
TCONS_00014155 | 0.20 | down | 6.11E–14 | 7 | + | 65959182 | 65960476 | Intergenic | Human LincRNA Catalog |
ENST00000563833.1 | 0.20 | down | 3.97E–09 | 4 | - | 103421997 | 103422476 | Divergent | ENSEMBL |